Right click options not showing up for jsmol

asked 2017-12-01 23:28:29 +0100

Nonlocal
23 ●4

I'm using implicit_plot3d to create an image. Everything works great setting up the image and jsmol produces a nice looking plot. I right click to be able to interact with the plot such as zoom; however, when I highlight the zoom option (as well as many of the other options), the set of sub-options does not appear. I've tried in multiple browsers (firefox, chrome, and internet explorer), but I'm not having success with any of them. It appears the sub-menu options are trying to appear but they do not have space to display them. Any help would be greatly appreciated. I took a picture of it to make it a little easier to see, but I don't seem to have the karma to upload or link. It can be found at this address though: ibb.co/nwVDEb.

answered 2017-12-02 14:43:01 +0100

eric_g
8469 ●10 ●62 ●168 https://luth.obspm.fr/...

Unfortunately, this is a known bug with the default 3D viewer (Jmol) in Jupyter notebook. Use instead the new threejs viewer, like in this example:

var('x y z')
T = RDF(golden_ratio)
F = 2 - (cos(x+T*y) + cos(x-T*y) + cos(y+T*z) + cos(y-T*z) + cos(z-T*x) + cos(z+T*x))
r = 4.77
G = implicit_plot3d(F, (x,-r,r), (y,-r,r), (z,-r,r), plot_points=40, color='darkkhaki')
show(G, viewer='threejs')

Then, you can perform the following actions with the mouse buttons:

left to rotate the object
middle to zoom in/out
right to translate the object

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Okay thanks for the info. I actually was trying threejs today, but I was having trouble using a colormap. Does threejs have this capability or is it only for single color schemes?

Nonlocal ( 2017-12-02 15:56:59 +0100 )edit

Not at the moment...The list of currently supported options of theejs is here.

eric_g ( 2017-12-02 17:23:45 +0100 )edit

I see. Well thanks for the help. I appreciate it.

Nonlocal ( 2017-12-03 05:20:33 +0100 )edit

for completeness, the issue is here https://trac.sagemath.org/ticket/19529

j.c. ( 2018-03-03 14:05:53 +0100 )edit

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