Compiling SAGE 5.5 -- Matplot Lib Fails to find Numpy
I'm currently compiling SAGE 5.5 and running in to the following errors (from the install.log):
68513 ========================================================================== ==
68514 BUILDING MATPLOTLIB
68515 matplotlib: 1.1.0
68516 python: 2.7.3 (default, Jan 7 2013, 11:22:35) [GCC 4.4.6
68517 20120305 (Red Hat 4.4.6-4)]
68518 platform: linux2
68519
68520 REQUIRED DEPENDENCIES
68521 numpy: no
68522 * You must install numpy 1.1 or later to build
68523 * matplotlib.
68524 Error building matplotlib package.
However, if I check the installation of numpy in install.log, I see the following:
63222 Successfully installed numpy-1.5.1.p1
Why is matplotlib not finding numpy? Is there a way of forcing the path? This seems like something that should "Just Work".
My build process:
- Untar sage-5.5
- cd sage-5.5
- make
ADDENDUM:
I've included a bit more debugging information, some things removed for privacy sake.
sake.
CPU: Intel(R) Xeon(R) CPU W3530 @ 2.80GHz
Memory: 12GB
Operating System: RHEL 6
Kernel: 2.6.32-279.19.1.el6.x86_64
Compiler:
Using built-in specs.
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man
--infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla
--enable-bootstrap --enable-shared --enable-threads=posix
--enable-checking=release --with-system-zlib --enable-__cxa_atexit
--disable-libunwind-exceptions --enable-gnu-unique-object
--enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk
--disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre
--enable-libgcj-multifile --enable-java-maintainer-mode
--with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib
--with-ppl --with-cloog --with-tune=generic --with-arch_32=i686
--build=x86_64-redhat-linux
Thread model: posix
gcc version 4.4.6 20120305 (Red Hat 4.4.6-4) (GCC)
Environmental Variables:
MALLOC_CHECK_=1
SHELL=/bin/bash
TERM=screen
HISTSIZE=1000
QTDIR=/usr/lib64/qt-3.3
QTINC=/usr/lib64/qt-3.3/include
SSH_TTY=/dev/pts/0
LS_COLORS=rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.tbz=01;31:*.tbz2=01;31:*.bz=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=01;36:*.au=01;36:*.flac=01;36:*.mid=01;36:*.midi=01;36:*.mka=01;36:*.mp3=01;36:*.mpc=01;36:*.ogg=01;36:*.ra=01;36:*.wav=01;36:*.axa=01;36:*.oga=01;36:*.spx=01;36:*.xspf=01;36:
G_SLICE=debug-blocks
TERMCAP=SC|screen|VT 100/ANSI X3.64 virtual terminal:\
:DO=\E[%dB:LE=\E[%dD:RI=\E[%dC:UP=\E[%dA:bs:bt=\E[Z:\
:cd=\E[J:ce=\E[K:cl=\E[H\E[J:cm=\E[%i%d;%dH:ct=\E[3g:\
:do=^J:nd=\E[C:pt:rc=\E8:rs=\Ec:sc=\E7:st=\EH:up=\EM:\
:le=^H:bl=^G:cr=^M:it#8:ho=\E[H:nw=\EE:ta=^I:is=\E)0:\
:li#24:co#80:am:xn:xv:LP:sr=\EM:al=\E[L:AL=\E[%dL:\
:cs=\E[%i%d;%dr:dl=\E[M:DL=\E[%dM:dc=\E[P:DC=\E[%dP:\
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:#2=\E[1;2H:#3=\E[2;2~:#4=\E[1;2D:%c=\E[6;2~:%e=\E[5;2~:\
:%i=\E[1;2C:kh=\E[1~:@1=\E[1~:kH=\E[4~:@7=\E[4~:\
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:kr=\EOC:kl=\EOD:km:
PATH=/usr/lib64/qt-3.3/bin:/usr/kerberos/sbin:/usr/kerberos/bin:/usr/local/cuda/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin
STY=1101.pts-0.beetle
PWD=/u/drwhom/nobackup/sage-5.5
_LMFILES_=/etc/modulefiles/soic.use.own:/etc/modulefiles/soic
EDITOR=vim
LANG=en_US.UTF-8
KDE_IS_PRELINKED=1
HISTCONTROL=ignoredups
SSH_ASKPASS=/usr/libexec/openssh/gnome-ssh-askpass
LOADEDLOCALMODULES=
MALLOC_PERTURB_=183
SHLVL=2
CVS_RSH=ssh
QTLIB=/usr/lib64/qt-3.3/lib
WINDOW=0
MODULESHOME=/usr/share/Modules
LESSOPEN=|/usr/bin/lesspipe.sh %s
DISPLAY=localhost:10.0
G_BROKEN_FILENAMES=1
module=() { eval `/usr/bin/modulecmd bash $*`
}
_=/bin/env
