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2012-09-06 14:47:58 +0200 | commented answer | import sage packages in python |
2012-09-06 14:47:42 +0200 | marked best answer | import sage packages in python Matrix -> type 'sage.matrix.matrix_integer_dense.Matrix_integer_dense' from sage.matrix.all import Matrix or from sage.matrix.constructor import Matrix
vector -> type 'sage.modules.vector_integer_dense.Vector_integer_dense' from sage.modules.free_module_element import vector
ZZ -> type 'sage.rings.integer_ring.IntegerRing_class' from sage.rings.integer_ring import ZZ
MixedIntegerLinearProgram -> type 'sage.numerical.mip.MixedIntegerLinearProgram' from sage.numerical.mip import MixedIntegerLinearProgram
Once you know roughly where the class is defined, for example Matrix is defined somewhere in SAGE_ROOT/devel/sage/sage/matrix/ , take a look at the file all.py in that directory. In this case you'll find a line from constructor import matrix, Matrix, column_matrix, random_matrix, diagonal_matrix, identity_matrix, block_matrix, block_diagonal_matrix, jordan_block, zero_matrix, ones_matrix, elementary_matrix, companion_matrix
So that tells you that you can import Matrix from sage.matrix.all or from sage.matrix.constructor . Your other examples can be dealt with similarly. |
2012-09-06 13:35:55 +0200 | answered a question | Can I use amsmath in notebook? Try the following in a notebook: from sage.misc.latex import latex_extra_preamble
latex.add_to_preamble('\\usepackage{amsmath}')
latex.add_to_preamble('\\usepackage{amsthm}')
latex.add_to_preamble('\\usepackage{amssymb}')
|
2012-09-06 13:32:39 +0200 | commented answer | Graphs from inside a function you can use show(), save('/my/favorite/folder/for/graphs/graph1.png'), return graph object from the function and have another function show it. |
2012-09-06 13:29:57 +0200 | asked a question | import sage packages in python An easy way to use sage in python files is demonstrated in the Sage Tutorial. #!/usr/bin/env sage -python
import sys
from sage.all import *
if len(sys.argv) != 2:
print "Usage: %s <n>"%sys.argv[0]
print "Outputs the prime factorization of n."
sys.exit(1)
print factor(sage_eval(sys.argv[1]))
Well, what if I don't want to import all of sage as shown above using: from sage.all import *
Instead of this command above, I just want to import the following: - Matrix -> type 'sage.matrix.matrix_integer_dense.Matrix_integer_dense'
- vector -> type 'sage.modules.vector_integer_dense.Vector_integer_dense'
- ZZ -> type 'sage.rings.integer_ring.IntegerRing_class'
- MixedIntegerLinearProgram -> type 'sage.numerical.mip.MixedIntegerLinearProgram'
So I should be able to write something like this in python from sage.library.package.for.Matrix import *
from sage.library.package.for.vector import *
from sage.library.package.for.ZZ import *
from sage.library.package.for.MixedIntegerLinearProgram import *
I just don't know what they are. Any help is appreciated. Thanks. |
2012-07-03 18:19:51 +0200 | commented answer | TypeError: 'int' object is not iterable Oh boy... I feel silly how that stumped me all day long. Thank you! |
2012-07-03 18:19:08 +0200 | marked best answer | TypeError: 'int' object is not iterable The problem is in the line dict = {j:Set(int(Vec[i]))}
The Set constructor takes an iterable object and the python int type is not iterable. If you change the line to: dict = {j:Set( [int(Vec[i])] )}
that problem should go away. |
2012-07-03 13:03:11 +0200 | asked a question | TypeError: 'int' object is not iterable Hello, For a given matrix M (m by n) and vector V of size n, my goal is to do the following: - Take the $\text{i}^{\text{th}}$ column of M and convert them as keywords for a dictionary and associate the keywords to the $\text{i}^{\text{th}}$ value of the vector V.
- I do (1) in MatVec(M,V) in the code below by creating a dictionary for each keyword and value. Finally I try to merge all the dictionaries.
Here is my code: def DictionaryMerge(*args):
import collections
super_dict = collections.defaultdict(set)
for d in args:
for k, v in d.iteritmes():
super_dict[k].add(v)
return super_dict
def MatVec(M,V):
from sets import Set
Vec = V.list()
MatCols = M.ncols()
D2 = {}
for i in range(MatCols):
ColumnVec = M.column(i).list()
CVec = list()
for k in range(len(ColumnVec)):
CVec.append(int(ColumnVec[k]))
for j in CVec:
dict = {j:Set(int(Vec[i]))}
D2 = DictionaryMerge(dict,D2)
return dict
M = matrix([[(i+1)*(j+2) for i in range(5)] for j in range(6)])
V = vector([int(i+100) for i in range(5)])
MatVec(M,V)
The error I get is: Traceback (most recent call last): return super_dict
File "", line 1, in <module>
File "/tmp/tmp4m6HiR/___code___.py", line 29, in <module>
exec compile(u'MatVec(M,V)
File "", line 1, in <module>
File "/tmp/tmp4m6HiR/___code___.py", line 22, in MatVec
dict = {j:Set(int(Vec[i]))}
File "/home/usr111/sage/local/lib/python/sets.py", line 414, in __init__
self._update(iterable)
File "/home/usr111/sage/local/lib/python/sets.py", line 368, in _update
for element in iterable:
TypeError: 'int' object is not iterable
I am not so sure why I am getting this error. |
2012-07-03 12:11:51 +0200 | answered a question | Emacs IPython Notebook perhaps someone can forward this to the sage trac or provide it a tracking number (if the idea has not been considered already). |
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2012-06-20 14:46:13 +0200 | answered a question | "code for hash md5 was not found" after fresh Sage 5.0 install on fresh Ubuntu 12.04 install Try installing libssl0.9.8. e.g.: sudo apt-get install libssl0.9.8
I got a similar error before installing the library above: ----------------------------------------------------------------------
| Sage Version 5.0.1, Release Date: 2012-06-10 |
| Type notebook() for the GUI, and license() for information. |
----------------------------------------------------------------------
The Sage installation tree may have moved
(from /scratch/buildbot/sage/redhawk-1/redhawk_binary/build/sage-5.0.1 to /home/clinton/sage).
Changing various hardcoded paths...
(Please wait at most a few minutes.)
DO NOT INTERRUPT THIS.
Done resetting paths.
ERROR:root:code for hash md5 was not found.
Traceback (most recent call last):
File "/home/clinton/sage/local/lib/python/hashlib.py", line 139, in <module>
globals()[__func_name] = __get_hash(__func_name)
File "/home/clinton/sage/local/lib/python/hashlib.py", line 91, in __get_builtin_constructor
raise ValueError('unsupported hash type %s' % name)
ValueError: unsupported hash type md5
ERROR:root:code for hash sha1 was not found.
Traceback (most recent call last):
File "/home/clinton/sage/local/lib/python/hashlib.py", line 139, in <module>
globals()[__func_name] = __get_hash(__func_name)
File "/home/clinton/sage/local/lib/python/hashlib.py", line 91, in __get_builtin_constructor
raise ValueError('unsupported hash type %s' % name)
ValueError: unsupported hash type sha1
ERROR:root:code for hash sha224 was not found.
Traceback (most recent call last):
File "/home/clinton/sage/local/lib/python/hashlib.py", line 139, in <module>
globals()[__func_name] = __get_hash(__func_name)
File "/home/clinton/sage/local/lib/python/hashlib.py", line 91, in __get_builtin_constructor
raise ValueError('unsupported hash type %s' % name)
ValueError: unsupported hash type sha224
ERROR:root:code for hash sha256 was not found.
Traceback (most recent call last):
File "/home/clinton/sage/local/lib/python/hashlib.py", line 139, in <module>
globals()[__func_name] = __get_hash(__func_name)
File "/home/clinton/sage/local/lib/python/hashlib.py", line 91, in __get_builtin_constructor
raise ValueError('unsupported hash type %s' % name)
ValueError: unsupported hash type sha256
ERROR:root:code for hash sha384 was not found.
Traceback (most recent call last):
File "/home/clinton/sage/local/lib/python/hashlib.py", line 139, in <module>
globals()[__func_name] = __get_hash(__func_name)
File "/home/clinton/sage/local/lib/python/hashlib.py", line 91, in __get_builtin_constructor
raise ValueError('unsupported hash type %s' % name)
ValueError: unsupported hash type sha384
ERROR:root:code for hash sha512 was not found.
Traceback (most recent call last):
File "/home/clinton/sage/local/lib/python/hashlib.py", line 139, in <module>
globals()[__func_name] = __get_hash(__func_name)
File "/home/clinton/sage/local/lib/python/hashlib.py", line 91, in __get_builtin_constructor
raise ValueError('unsupported hash type %s' % name)
ValueError: unsupported hash type sha512
Traceback (most recent call last):
File "/home/clinton/sage/local/bin/sage-ipython", line 18, in <module>
import IPython
File "/home/clinton/sage/local/lib/python2.7/site-packages/IPython/__init__.py", line 58, in <module>
__import__(name,glob,loc,[])
File "/home/clinton/sage/local/lib/python2.7/site-packages/IPython/ipstruct.py", line 17, in <module>
from IPython.genutils import list2dict2
File "/home/clinton/sage/local/lib/python2.7/site-packages/IPython/genutils.py", line 53, in <module>
from IPython.external.path import path
File "/home/clinton/sage ... (more) |
2012-05-29 10:57:24 +0200 | commented answer | How to find the path of the maximal distance between two vertices on a complete digraph? That was a wonderful explanation of the solution. Thank you!!! |
2012-05-29 10:56:52 +0200 | marked best answer | How to find the path of the maximal distance between two vertices on a complete digraph? One way to do the general case uses the all_paths method: sage: [path for path in g.all_paths(0,1) if len(path) == 5]
[[0, 2, 3, 4, 1], [0, 2, 4, 3, 1], [0, 3, 2, 4, 1], [0, 3, 4, 2, 1], [0, 4, 2, 3, 1], [0, 4, 3, 2, 1]]
sage: [path for path in g.all_paths(0,1) if len(path) == 4]
[[0, 2, 3, 1], [0, 2, 4, 1], [0, 3, 2, 1], [0, 3, 4, 1], [0, 4, 2, 1], [0, 4, 3, 1]]
sage: [path for path in g.all_paths(0,1) if len(path) == 3]
[[0, 2, 1], [0, 3, 1], [0, 4, 1]]
sage: [path for path in g.all_paths(0,1) if len(path) == 2]
[[0, 1]]
There is also a longest_path method that takes source and destination as input parameters, but there seems to be a bug with directed graphs. I've made this #13019. At the theoretical level, the problem is really easy for this specific graph since there are edges between all the vertices. Thus, you can just pick the endpoints and take any permutation of the remaining vertices (or subset of them) to get a path of a fixed length. |
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2012-05-25 16:27:40 +0200 | commented question | How to find the path of the maximal distance between two vertices on a complete digraph? In general, I would also like to find if the complete digraph has n vertices, how can I find the path(s) from any two vertices of distance (n-1), (n-2), ..., 2? |
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2012-05-25 15:29:27 +0200 | answered a question | How to install sage5 in OpenSuSE 11.4 Have you tried building from source? If you need help installing the necessary packages to make sage, review the packages you'll need in SUSE from the debian repositories for build-essential, m4, and gfortran |
2012-05-25 14:06:58 +0200 | asked a question | How to find the path of the maximal distance between two vertices on a complete digraph? I was wondering how can I find the path of the maximal distance between two vertices on a complete digraph.
Suppose the digraph has 5 vertices: sage: g = graphs.CompleteGraph(5).to_directed() I have seen a maximal flow example which is nice but it is not the same type of problem. How can I use sage to find the longest path? |
2011-08-16 10:45:55 +0200 | answered a question | Why does Sage not install with Vista? did you mean this link: "http://localhost:8000 "? At which step are you stuck on in the "http://www.sagemath.org/mirror/win/README.txt"? |