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Hi, I am experiencing the same error as you when I use the terminal window in the top right of the file browser. Based on this thread I think the issue has something to do with whether you are connecting to github via ssh or https.

WORKAROUND: The workaround is very simple:
1. Make a .term file instead of using the terminal box
2. use the .term file to run your git command

This worked for me, I hope it solves your problem