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In calculating the basis, it seems to be doing some very strange imports. Do you have any PATH set strangely? Where are you running this from? In particular, lines like


There should not be anything using an outside version of numpy, only the Sage version of it should be used. I'm also not sure what


is; why would this file be in some random folder? (Perhaps you are working on it?)

So my advice (this is sort of an answer) is to make sure you don't have any code like that "visible" to Sage. Since this is a compiled version in the app bundle, I don't know why that would happen, but apparently Sage is getting confused by all your different versions of some code.