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You can try something very dirty that will probably work. Sage's spkg are stored in spkg/standard. I assume you have a tarball for scipy-0.9.
1) go to spkg/standard
2) tar xvfj scipy-0.8
3) cd scipy-0.8
4) rm -rf src/
5) mkdir src
6) untar the scipy-0.9 tarball
7) copy the content of the scipy-0.9 folder in the src folder
8) going back to spkg/standard
9) mv scipy-0.8 scipy-0.9
10) tar cvf scipy-0.9.tar scipy-0.9
11) bzip2 scipy-0.9.tar
12) mv scipy-0.9.tar.bz2 scipy-0.9.spkg
13) cd ../..
14) sage -f scipy-0.9
15) wait for scipy-0.9 to install (cross fingers)
16) start sage (no need for sage -b scipy is a runtime dependency not a build time one)
17) enjoy scipy-0.9 in sage - hopefully
