Trouble installing nauty on Mac OS X 10.10
Hi all,
I am trying to install nauty on the new Mac operating system. When I run "sage -i nauty 25" in terminal, I get the following error message:
checking build system type... i686-apple-darwin14.0.0
checking host system type... i686-apple-darwin14.0.0
checking for gcc... gcc
checking whether the C compiler works... no
configure: error: in `/Applications/sage/local/var/tmp/sage/build/nauty-25/src':
configure: error: C compiler cannot create executables
See `config.log' for more details.
Error configuring nauty.
I have Xcode downloaded and have installed the newest update of the Command Line Tools for OS X 10.10. Any suggestions?
Thanks!
Edit: Here is my config.log:My config.log can be found here
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by configure, which was
generated by GNU Autoconf 2.65. Invocation command line was
$ ./configure --prefix=/Applications/sage/local
## --------- ##
## Platform. ##
## --------- ##
hostname = Macs-MBP.eau.wi.charter.com
uname -m = x86_64
uname -r = 14.0.0
uname -s = Darwin
uname -v = Darwin Kernel Version 14.0.0: Fri Sep 19 00:26:44 PDT 2014; root:xnu-2782.1.97~2/RELEASE_X86_64
/usr/bin/uname -p = i386
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = Mach kernel version:
Darwin Kernel Version 14.0.0: Fri Sep 19 00:26:44 PDT 2014; root:xnu-2782.1.97~2/RELEASE_X86_64
Kernel configured for up to 2 processors.
2 processors are physically available.
2 processors are logically available.
Processor type: i486 (Intel 80486)
Processors active: 0 1
Primary memory available: 8.00 gigabytes
Default processor set: 247 tasks, 1075 threads, 2 processors
Load average: 5.20, Mach factor: 0.32
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /Applications/sage/src/bin
PATH: /Applications/sage/local/bin
PATH: /usr/local/bin
PATH: /usr/bin
PATH: /bin
PATH: /usr/sbin
PATH: /sbin
PATH: /usr/texbin
## ----------- ##
## Core tests. ##
## ----------- ##
configure:2395: checking build system type
configure:2409: result: i686-apple-darwin14.0.0
configure:2429: checking host system type
configure:2442: result: i686-apple-darwin14.0.0
configure:2512: checking for gcc
configure:2539: result: gcc
configure:2768: checking for C compiler version
configure:2777: gcc --version >&5
gcc (GCC) 4.7.3
Copyright (C) 2012 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:2788: $? = 0
configure:2777: gcc -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/Applications/sage/local/bin/../libexec/gcc/x86_64-apple-darwin13.3.0/4.7.3/lto-wrapper
Target: x86_64-apple-darwin13.3.0
Configured with: ../src/configure --prefix=/Users/buildslave-sage/slave/sage_git/build/local --with-local-prefix=/Users/buildslave-sage/slave/sage_git/build/local --with-gmp=/Users/buildslave-sage/slave/sage_git/build/local --with-mpfr=/Users/buildslave-sage/slave/sage_git/build/local --with-mpc=/Users/buildslave-sage/slave/sage_git/build/local --with-system-zlib --disable-multilib --disable-nls
Thread model: posix
gcc version 4.7.3 (GCC)
configure:2788: $? = 0
configure:2777: gcc -V >&5
gcc: error: unrecognized command line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:2788: $? = 1
configure:2777: gcc -qversion >&5
gcc: error: unrecognized command line option '-qversion'
gcc: fatal error: no input files
compilation terminated.
configure:2788: $? = 1
configure:2808: checking whether the C compiler works
configure:2830: gcc conftest.c >&5
conftest.c:1:0: error: unknown value '10.10' of -mmacosx-version-min
configure:2834: $? = 1
configure:2872: result: no
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME ""
| #define PACKAGE_TARNAME ""
| #define PACKAGE_VERSION ""
| #define PACKAGE_STRING ""
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| /* end confdefs.h. */
|
| int
| main ()
| {
|
| ;
| return 0;
| }
configure:2877: error: in `/Applications/sage/local/var/tmp/sage/build/nauty-25/src':
configure:2881: error: C compiler cannot create executables
See `config.log' for more details.
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_build=i686-apple-darwin14.0.0
ac_cv_env_CC_set=set
ac_cv_env_CC_value=gcc
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=set
ac_cv_env_CPP_value=cpp
ac_cv_env_LDFLAGS_set=set
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_host=i686-apple-darwin14.0.0
ac_cv_prog_ac_ct_CC=gcc
## ----------------- ##
## Output variables. ##
## ----------------- ##
CC='gcc'
CFLAGS=''
CPP='cpp'
CPPFLAGS=''
DEFS=''
ECHO_C='\c'
ECHO_N=''
ECHO_T=''
EGREP=''
EXEEXT=''
GREP=''
LDFLAGS=''
LIBOBJS=''
LIBS=''
LTLIBOBJS=''
MORECFLAGS=''
OBJEXT=''
PACKAGE_BUGREPORT=''
PACKAGE_NAME=''
PACKAGE_STRING=''
PACKAGE_TARNAME=''
PACKAGE_URL=''
PACKAGE_VERSION=''
PATH_SEPARATOR=':'
SHELL='/bin/sh'
ac_ct_CC='gcc'
ac_cv_sizeof_int=''
ac_cv_sizeof_long=''
ac_cv_sizeof_long_long=''
ac_cv_sys_file_offset_bits=''
ac_cv_tls=''
bindir='${exec_prefix}/bin'
build='i686-apple-darwin14.0.0'
build_alias=''
build_cpu='i686'
build_os='darwin14.0.0'
build_vendor='apple'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
default_wordsize=''
docdir='${datarootdir}/doc/${PACKAGE}'
dvidir='${docdir}'
edit_msg=''
exec_prefix='NONE'
fdopen_dec=''
ftell_dec=''
has_math_inf=''
have_ansicontrols=''
have_clz=''
have_clzl=''
have_clzll=''
have_const=''
have_fseeko=''
have_getrusage=''
have_gettimeofday=''
have_isatty=''
have_perror=''
have_pid_t=''
have_pipe=''
have_popen=''
have_pthread=''
have_putenv=''
have_setenv=''
have_sigaction=''
have_sigprocmask=''
have_time=''
have_times=''
have_tls=''
have_wait=''
header_errno_h=''
header_pthread_h=''
header_signal_h=''
header_stddef_h=''
header_stdlib_h=''
header_string_h=''
header_sys_types_h=''
header_sys_wait_h=''
header_unistd_h=''
host='i686-apple-darwin14.0.0'
host_alias=''
host_cpu='i686'
host_os='darwin14.0.0'
host_vendor='apple'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
lok=''
malloc_dec=''
mandir='${datarootdir}/man'
oldincludedir='/usr/include'
pdfdir='${docdir}'
popen_dec=''
prefix='/Applications/sage/local'
program_transform_name='s,x,x,'
psdir='${docdir}'
putenv_dec=''
sbindir='${exec_prefix}/sbin'
setenv_dec=''
sharedstatedir='${prefix}/com'
shortg_or_null=''
sort_newparams_ok=''
sort_prog=''
stdio_nolock=''
sysconfdir='${prefix}/etc'
target_alias=''
testprogs=''
threadlib=''
## ----------- ##
## confdefs.h. ##
## ----------- ##
/* confdefs.h */
#define PACKAGE_NAME ""
#define PACKAGE_TARNAME ""
#define PACKAGE_VERSION ""
#define PACKAGE_STRING ""
#define PACKAGE_BUGREPORT ""
#define PACKAGE_URL ""
configure: exit 77
