I would like to use VectorSpaceMorphism when the underlying domain, codomain and matrix are sparse. However, the morphism seems to convert everything to dense. The following is from Sage 5.9.
sage: V = VectorSpace(QQ, 2, sparse=True) sage: V Sparse vector space of dimension 2 over Rational Field sage: A = matrix(QQ, 2, 2, [[5, 6], [7, 8]], sparse=True) sage: type(A) sage.matrix.matrix_rational_sparse.Matrix_rational_sparse sage: f = V.hom(A, V) sage: f.matrix() [5 6] [7 8] sage: type(f.matrix()) sage.matrix.matrix_rational_dense.Matrix_rational_dense
V.hom doesn't take the keyword 'sparse'.
sage: g = V.hom(A, V, sparse=True) ... TypeError: hom() got an unexpected keyword argument 'sparse'
Let v be a vector in V, which is sparse. Tests with pdb show that when we call f(v), it converts v to dense behind the scenes, multiplies by the dense matrix, and and converts the dense vector result back to sparse. Of course this is slow. The more fundamental issue is that, in some of my applications, A will be too large to store densely.