ASKSAGE: Sage Q&A Forum - RSS feedhttps://ask.sagemath.org/questions/Q&A Forum for SageenCopyright Sage, 2010. Some rights reserved under creative commons license.Mon, 08 Oct 2018 19:41:03 +0200Ideal.variety() when working with symbolic ringshttps://ask.sagemath.org/question/43873/idealvariety-when-working-with-symbolic-rings/I have a system of multivariate polynomials I would like to solve (the equations come from chemical reaction networks). I have many symbolic constants, but I've managed to generate a Groebner basis with the following code (using a toy example with solutions {{x: x0, y:0},{x: 0,y: x0}):
x0 = var('x0') # In practice, there are many constants
S.<x,y> = PolynomialRing(SR,order='lex'); # in practice, there are 3-10 variables
I = S.ideal(
x**2 + y**2 - x0**2,
x + y - x0
)
print(I.dimension()) # dimension should always be zero
# >> 0
print(I.groebner_basis())
# >> [x + y - x0,
# >> y^2 + (-x0)*y]
In practice, I get many resulting equations which are extremely long, and it is numerically challenging to sequentially find the roots of these polynomials (in downstream code, I will get values for the constant parameters and then need to return solutions to these equations on the fly). Using the `I.variety()` method would be great to symbolically isolate all possible solutions, but I get confusing internal errors when I try to evaluate it.
print(I.variety()) # should be equivalent to: I.variety(ring=SR)
#/Users/ksb/SageMath/local/lib/python2.7/site-packages/sage/rings/polynomial/multi_polynomial_ideal.pyc in _variety(T, V, v)
# 2340
# 2341 variable = f.variable(0)
#-> 2342 roots = f.univariate_polynomial().roots(ring=ring, multiplicities=False)
# 2343
# 2344 for root in roots:
#
#/Users/ksb/SageMath/local/lib/python2.7/site-packages/sage/rings/polynomial/polynomial_element.pyx in sage.rings.polynomial.polynomial_element.Polynomial.roots (build/cythonized/sage/rings/polynomial/polynomial_element.c:68811)()
# 7714 return l
# 7715 else:
#-> 7716 return [val for val,m in l]
# 7717 vname = 'do_not_use_this_name_in_a_polynomial_coefficient'
# 7718 var = SR(vname)
# TypeError: 'sage.symbolic.expression.Expression' object is not iterable
Is this expected behavior? When I try `f.univariate_polynomial().roots(ring=ring, multiplicities=False)` (setting `multiplicities=True` is what `I.variety()` does and leads to the error) I get `[1/2*x0,2]` for roots, which makes little sense (it seems like the roots should be `[0,-x0]`).
I would be happy to convert the `MPolynomial_polydict` (or the `sage.rings.polynomial.polynomial_ring.PolynomialRing_field_with_category.element_class` generated by `univariate_polynomial()`) into a symbolic expression that I could just set it equal to zero and use `solve` on it, but I don't know how to do this type conversion. ksbMon, 08 Oct 2018 19:41:03 +0200https://ask.sagemath.org/question/43873/