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Setting the combinatorial embedding does not immediately affect how the graph is plotted. However, you can call one of the layout algorithms that use this combinatorial embedding, such as planar, with save_pos=True.

G = Graph([[0,1,2,3,5,4],[[0,1],[0,2],[0,3],[0,4],[0,5]]])
G.set_embedding({0: [1,2,3,4,5], 1 : [0], 2 : [0], 3:[0], 4:[0], 5:[0]})
G.layout('planar', save_pos=True)
G.show()

Indeed we get clockwise 1, 2, 3, 4, 5.

Setting the combinatorial embedding does not immediately affect how the graph is plotted. However, you can call one of the layout algorithms that use this combinatorial embedding, such as planar, with save_pos=True.

G = Graph([[0,1,2,3,5,4],[[0,1],[0,2],[0,3],[0,4],[0,5]]])
G.set_embedding({0: [1,2,3,4,5], 1 : [0], 2 : [0], 3:[0], 4:[0], 5:[0]})
G.layout('planar', save_pos=True)
G.show()

Indeed we get clockwise 1, 2, 3, 4, 5.